Fixed-term

Postdoctoral researcher position on the molecular mechanisms of actin-based in intracellular bacterial pathogens

A full-time postdoctoral position is available in the Membrane Enzymology research group at the Groningen Biomolecular Sciences and Biotechnology Institute (GBB), Faculty of Science and Engineering. The position is part of the ERC Starting Grant project ACTIN in ACTION, which investigates the molecular mechanisms of actin-based motility in the intracellular bacterial pathogens Shigella and Listeria. These pathogens use the surface proteins IcsA and ActA to recruit host actin-regulatory factors and generate actin comet tails that propel the bacteria through infected cells. The successful candidate will combine biochemical reconstitution, fluorescence microscopy and structural biology to determine how this process is regulated at the molecular level. The project will make extensive use of the group’s in-house Talos Arctica electron microscope, which is being equipped with a new-generation electron detector through an ERC-funded upgrade.   What are you going to do? The postdoc will work on an ERC Starting Grant-funded project focused on the molecular mechanisms of actin-based motility in intracellular bacterial pathogens. The project investigates how Shigella and Listeria hijack the host actin cytoskeleton to move inside infected cells. These bacteria use specialized surface proteins, IcsA and ActA, to recruit host actin-regulatory proteins and generate actin comet tails that propel the bacteria through the cytoplasm. The main goal of the postdoc project will be to understand how this process is regulated at the molecular and structural level. The postdoc will establish and use in vitro reconstitution assays for actin-based motility, combining engineered bacterial systems displaying IcsA or ActA with purified host actin-regulatory proteins. Using fluorescence microscopy, the postdoc will quantify actin-tail formation, bacterial movement, filament elongation, and the effects of regulatory host factors on these processes. Candidate regulators will be selected based on preliminary mass-spectrometry data and literature, and their effects on actin-based motility will be tested biochemically and microscopically. A central part of the project will be structural analysis by cryo-electron tomography and, where applicable, single-particle cryo-EM. The postdoc will prepare vitrified samples of bacteria undergoing actin-based motility, collect and process cryo-ET data, and determine how bacterial effectors, host regulatory proteins and actin filaments are organized within actin comet tails. This work will make use of the in- house Talos Arctica electron microscope, which will be upgraded with a new camera through the ERC-funded investment. Overall, the postdoc will contribute to a mechanistic model explaining how bacterial pathogens control the host actin cytoskeleton to drive intracellular motility. Who are you? You are a motivated and independent researcher with a PhD in structural biology, biochemistry, molecular biology, microbiology, biophysics or a related discipline. You have hands-on experience with recombinant protein production and purification and preferably with actin biochemistry, fluorescence microscopy, cryo-electron microscopy or cryo-electron tomography. Experience in cryo-EM or cryo-ET sample preparation, data collection and image processing is particularly valuable. You are interested in understanding molecular mechanisms of host–pathogen interactions and are willing to combine biochemical, microscopic and structural approaches. You can work independently, contribute effectively to a collaborative research environment, communicate your results clearly and prepare scientific publications and presentations in English. What can you expect from us? In accordance with the collective labor agreement for Dutch universities, we offer a salary of at least € 4.241 (schaal 10.4) up to a maximum of € 4.571 (schaal 10.6) gross per month for a full-time employment contract. 232 vacation hours per year, based on a 38-hour workweek (1.0 FTE). You can also work more or fewer hours in exchange for more or fewer free hours. For example, with a 40-hour workweek, you save 96 extra free hours, and with a 36-hour workweek, you lose 96 hours. End-of-year bonus of 8.3% and 8% holiday allowance. Extensive opportunities for personal and professional development. The appointment is for one year, plus a possible extension of an additional two years. Where will you be working? At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. The Faculty of Science and Engineering (FSE) provides teaching and research across a wide range of disciplines, from physics and biology to artificial intelligence, mechanical engineering, and pharmacy. In close collaboration with partners from industry, healthcare, and society, we contribute to the urgent challenges of our time, such as energy, sustainability, digitization, and medical technology. Our community is open and informal, with more than 7,000 students, 1,000 PhD students, and 1,400 staff members from all over the world. If you would like to learn more about the Faculty of Science and Engineering, visit rug.nl/fse.  At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. Application procedure Step 1: Your application Step 2: Selection Step 3: First interview Step 4: Second interview and possible assessment or guest lecture Step 5: Terms of employment meeting Interested? Does this vacancy appeal to you? If so, click on the button below and apply straightaway. Please add the following documents to your application: CV. Cover letter. Application Form

PhD position in STED Super-Resolution Microscopy of cell division

What are you going to do? In this project, you will use state-of-the-art Stimulated Emission Depletion Microscopy (STED) to visualize the molecular machinery of cell division at high spatial and temporal resolution. By combining advanced imaging with quantitative analysis in a highly interdisciplinary research environment, you will investigate how nanoscale structures organize, interact, and adapt to drive one of the most fundamental processes in life. This project is ideal for students interested in the interface of physics and biology, and who are excited to uncover the principles that enable complex biological systems to function with such remarkable precision. The work will involve mammalian cell culture, advanced fluorescence live-cell microscopy, development of automated experimental workflows, image and data analysis, and scientific programming. The Molecular Biophysics group is part of the Zernike Institute for Advanced Materials, within the Faculty of Science and Engineering. Who are you? We are looking for an enthusiastic and talented PhD candidate with: ·      A MSc degree in biophysics. Depending on the specialization, a MSc in molecular biology, biotechnology/bioengineering, physics (optics) or equivalent certification also qualify (please provide transcripts during your application). ·      A strong experimental background in microscopy, molecular biophysics/biology, or cell biology. ·      Experience with python programming and cell culture will be seen as a strong asset. ·      Capacity to think analytically and creatively. ·      High motivation in pursuing academic research. ·      Ability to work in an international team in a streamlined and professional way. ·      An integrative and cooperative personality with excellent communicative and social skills. ·      Fluent proficiency in English – written and oral (please provide a proof of English language proficiency during your application). Please clearly explain in your motivation letter why you are applying for this position and how your previous education and work experience align with the PhD project. Additionally, upload a minimum of two letters of recommendation relevant to the proposed work. What can you expect from us? In accordance with the collective labor agreement for Dutch universities, we offer a salary of at least € 3.059 up to a maximum of € 3.881 (promovendus) gross per month for a full-time employment contract. 232 vacation hours per year, based on a 38-hour workweek (1.0 FTE). You can also work more or fewer hours in exchange for more or fewer free hours. For example, with a 40-hour workweek, you save 96 extra free hours, and with a 36-hour workweek, you lose 96 hours. End-of-year bonus of 8.3% and 8% holiday allowance. Extensive opportunities for personal and professional development. Promovendus: 1 year + 3 year Where will you be working? At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. The Faculty of Science and Engineering (FSE) provides teaching and research across a wide range of disciplines, from physics and biology to artificial intelligence, mechanical engineering, and pharmacy. In close collaboration with partners from industry, healthcare, and society, we contribute to the urgent challenges of our time, such as energy, sustainability, digitization, and medical technology. Our community is open and informal, with more than 7,000 students, 1,000 PhD students, and 1,400 staff members from all over the world. If you would like to learn more about the Faculty of Science and Engineering, visit rug.nl/fse.  At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. The Faculty of Science and Engineering (FSE) provides teaching and research across a wide range of disciplines, from physics and biology to artificial intelligence, mechanical engineering, and pharmacy. In close collaboration with partners from industry, healthcare, and society, we contribute to the urgent challenges of our time, such as energy, sustainability, digitization, and medical technology. Our community is open and informal, with more than 7,000 students, 1,000 PhD students, and 1,400 staff members from all over the world. If you would like to learn more about the Faculty of Science and Engineering, visit rug.nl/fse.  Application procedure Step 1: Your application Step 2: Selection Step 3: First interview Step 4: Second interview and possible assessment or guest lecture Step 5: Terms of employment meeting Interested? Does this vacancy appeal to you? If so, click on the button below and apply straightaway. Please add the following documents to your application: CV motivation letter 2 letters of recommendation Do you have any questions or need more information? Questions about the content of the job? Rifka Vlijm Associate Professor R.Vlijm@rug.nl Questions about your application process? Rifka Vlijm Associate Professor R.Vlijm@rug.nl Information about applying When scheduling meetings, we will take your schedule into account as much as possible. The University of Groningen considers social safety important. We strive to be a university where staff and students feel respected and at home, regardless of differences in background, experiences, perspectives, and identity. For more information, see also our page about our diversity policy. Application Form

PhD position Revealing Selective Cellular Transport with Super-Resolution Microscopy

What are you going to do? The goal of this PhD project is to use, among others, STED super-resolution microscopy to visualize how transport is occurring in the cell to unravel the role of unstructured proteins as filters in cellular transport processes. The work will involve mammalian and yeast cell culture, advanced fluorescence live-cell microscopy, development of automated experimental workflows, image and data analysis, and scientific programming. During this 4-year project you will work closely with the other team members within this NWO funded consortium “Holey trap”, in the groups of Prof. Patrick Onck (project lead, Zernike Institute), Rifka Vlijm (Zernike Institute), Liesbeth Veenhoff (UMCG) and Cees Dekker (TU Delft), promoting an interdisciplinary approach to this challenge. The work is done in the Zernike Institute for Advanced Materials that is part of the Faculty of Science and Engineering. Who are you? We are looking for an enthusiastic and talented PhD candidate with: ·      A MSc degree in biophysics. Depending on the specialization, a MSc in molecular biology, biotechnology/bioengineering, physics (optics) or equivalent certification also qualify (please provide transcripts during your application). ·      A strong experimental background in microscopy, molecular biophysics/biology, or cell biology. ·      Experience with python programming and cell culture will be seen as a strong asset. ·      Capacity to think analytically and creatively. ·      High motivation in pursuing academic research. ·      Ability to work in an international team in a streamlined and professional way. ·      An integrative and cooperative personality with excellent communicative and social skills ·      Fluent proficiency in English – written and oral (please provide a proof of English language proficiency during your application). Please clearly explain in your motivation letter why you are applying for this position and how your previous education and work experience align with the PhD project. Additionally, upload a minimum of two letters of recommendation relevant to the proposed work. What can you expect from us? In accordance with the collective labor agreement for Dutch universities, we offer a salary of at least € 3.059 up to a maximum of € 3.881 (promovendus) gross per month for a full-time employment contract. 232 vacation hours per year, based on a 38-hour workweek (1.0 FTE). You can also work more or fewer hours in exchange for more or fewer free hours. For example, with a 40-hour workweek, you save 96 extra free hours, and with a 36-hour workweek, you lose 96 hours. End-of-year bonus of 8.3% and 8% holiday allowance. Extensive opportunities for personal and professional development. Promovendus: 1 year + 3 year Where will you be working? At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. The Faculty of Science and Engineering (FSE) provides teaching and research across a wide range of disciplines, from physics and biology to artificial intelligence, mechanical engineering, and pharmacy. In close collaboration with partners from industry, healthcare, and society, we contribute to the urgent challenges of our time, such as energy, sustainability, digitization, and medical technology. Our community is open and informal, with more than 7,000 students, 1,000 PhD students, and 1,400 staff members from all over the world. If you would like to learn more about the Faculty of Science and Engineering, visit rug.nl/fse.  At the University of Groningen (UG), researchers from all fields of academia and technology are working on academic challenges and societal questions. Lecturers prepare their students for meaningful careers within or outside the academic world. Interdisciplinary research and teaching, sharing of knowledge, collaboration with businesses, government institutions, and societal organizations are aspects that are of the utmost importance to this European top university. The UG aims to be an open academic community with an inclusive and safe working climate that invites you to add your value. The Faculty of Science and Engineering (FSE) provides teaching and research across a wide range of disciplines, from physics and biology to artificial intelligence, mechanical engineering, and pharmacy. In close collaboration with partners from industry, healthcare, and society, we contribute to the urgent challenges of our time, such as energy, sustainability, digitization, and medical technology. Our community is open and informal, with more than 7,000 students, 1,000 PhD students, and 1,400 staff members from all over the world. If you would like to learn more about the Faculty of Science and Engineering, visit rug.nl/fse.  Application procedure Step 1: Your application Step 2: Selection The selection committee assesses your application and you will be notified as soon as possible whether you are invited for an interview. Step 3: First interview Step 4: Second interview and possible assessment or guest lecture Step 5: Terms of employment meeting Interested? Does this vacancy appeal to you? If so, click on the button below and apply straightaway. Please add the following documents to your application: CV Motivation letter 2 letters of recommendation. Application Form

PhD position in Genetic Susceptibility in Stem Cell-Derived Organoid Safety Testing

Why do people respond differently to harmful substances, and why are some individuals more sensitive to organ damage? This PhD project addresses these fundamental questions by investigating human toxicodynamic variability; the differences in how cells respond to chemical stress. These differences are partly driven by genetic variation, which influences cellular pathways involved in toxicity. Understanding this variation is essential for developing future safety testing strategies that reflect real human diversity. What you will do In this project, you will work with human induced pluripotent stem cells (iPSCs) and primary cells derived from donors with different (genetic) backgrounds. By differentiating these stem cells into organ specific cell types and 3D organoids together with CRISPR technology, you will study how genetic variants shape cellular responses to chemical exposure. Combined with advanced detection tools that visualize cellular stress responses, this approach allows you to map how individual’s background translate into toxicodynamic variability. The project serves as a proof of concept for integrating human variability into next‑generation in vitro safety testing. The knowledge generated will contribute to more accurate risk estimation and support the development of chemical safety assessments that better reflect human diversity. What you bring MSc in (Bio)-pharmaceutical Sciences, Biomedical Sciences or Biology   Expertise in (human) induced pluripotent stem cell culture, 3D in vitro systems, molecular and cell biology, gene editing, microscopy, cell signaling Interest in bioinformatics Written and oral proficiency in English Excellent scientific writing skills Enthusiastic and ambitious Independent thinker Team player Where you will work Curiosity and passion for science are what connect our people: the desire to know, understand, interpret, explain and create. Our mission is to provide excellent teaching and research across the full breadth of the sciences, contributing to solutions for major societal challenges. Our eight institutes, ranging from mathematics, computer science, astronomy, physics, chemistry, and biopharmaceutical sciences to biology and environmental sciences, along with the Lorentz Center and the Hortus botanicus, form the backbone of our faculty and have a strong mutual interconnectedness.  We work in a safe, stimulating and international environment where people work and study with pleasure and passion, and where building connections and collaboration, both within and beyond the faculty, are a clear choice. The faculty has over 2,700 staff members and more than 6,000 students enrolled in nine bachelor’s and fifteen master’s programmes. We are located in the heart of the Bio Science Park, one of Europe’s largest science parks, where academia and industry meet.  For more information, see: https://www.universiteitleiden.nl/en/science What we offer We offer a full-time (1.0 FTE, 38 hours) 4-year term position. Salary range from € 3.059,- to € 3.881,- gross per month (PhD student, pay scale P) in accordance with the Collective Labour Agreement for Dutch Universities. We aim to employ more women in areas where they are underrepresented. Women are therefore especially invited to apply. Leiden University offers an attractive benefits package with additional holiday (8%) and end-of-year bonuses (8.3 %), training and career development and sabbatical leave. Our individual choices model gives you some freedom to assemble your own set of terms and conditions. Candidates from outside the Netherlands may be eligible for a substantial tax break. For more information about employment conditions, see https://www.universiteitleiden.nl/en/working-at/job-application-procedure-and-employment-conditions All our PhD students are embedded in the Leiden University Graduate School of Science. Our graduate school offers several PhD training courses at three levels: professional courses, skills training and personal effectiveness. In addition, advanced courses to deepen scientific knowledge are offered by the research school. What we value Promoting an inclusive community is central to Leiden University’s values and vision. We strive to be an open community in which all students and staff members feel valued and respected, and are able to fully develop themselves. We consider an inclusive academic environment, where students and staff can share their experiences and viewpoints, to be essential for the development of talent. Want to apply or find out more? Enquiries can be made to Dr. Marije Niemeijer (m.c.niemeijer@lacdr.leidenuniv.nl; +31 71 5275919). If you have any questions about the procedure, please contact the secretariat of the Division of Cell Systems and Drug Safety, Marjolijn Lugthart (m.j.l.lugthart@lacdr.leidenuniv.nl; +31 71 5276270). Information about the faculty of science can be found at  http://www.science.leidenuniv.nl/index.php/english/ and about Leiden University at http://www.vacancies.leiden.edu/. To apply for this vacancy, please submit your application online via the blue button in our application system. Please ensure that you upload the following additional document quoting the vacancy number: Motivation letter Curriculum Vitae The transcripts of your BSc and MSc studies to date A copy of your (draft) Master’s thesis Preferably 2 reference letters Only applications received before 21 August 2026 can be considered. Starting date: fall 2026, flexible. Apply Now

Postdoctoral Researcher Position in Epigenome Engineering

Chemical modifications of histones and DNA provide an important regulatory layer for gene expression control and numerous other processes in the cell. In this context, individual and combinatorial modifications guide spatiotemporal recruitment of regulatory factors to specific regions in the genome. Despite many efforts to characterise chromatin-mediated regulation of gene activity, the direct involvement of chromatin marks in instructing transcriptional outcomes remains unclear and requires further investigation. Your job This project aims to bridge chromatin engineering and epigenomics to study epigenetic regulation of transcriptional processes. Potential approaches will involve manipulation of epigenetic marks in embryonic stem cells, investigating changes in epigenetic landscapes and transcription upon controlled manipulation, and/or engineering of synthetic chromatin states. You are encouraged to bring in your individual ideas and expertise to the current project and furthermore to develop new project ideas. Your qualities You are dedicated scientist with a background in chromatin biology and/or gene regulation and experience in cell engineering, molecular cloning, genomics, and computational data analysis workflows. In addition you: have obtained, or are on track to obtain, a PhD with first or co-author publications/preprints in the respective field; you are able to work independently as well as collaboratively in a team; demonstrate strong written and oral communication skills in English. Our offer an independent postdoc position for initially one year (1.0 FTE), with an extension of two years upon a positive evaluation; a gross monthly salary, depending on experience and qualifications, between € 3.546 and €5.538 in the case of full-time employment (salary scale 10 under the Collective Labour Agreement for Dutch Universities (CAO NU)); 8% holiday pay and 8.3% year-end bonus; a pension scheme, partially paid parental leave and flexible terms of employment based on the CAO NU. In addition to the terms of employment laid down in the CAO NU, Utrecht University also offers a range of its own schemes for employees. This includes arrangements for professional development, various types of leave, and options for sports and cultural activities. You can also tailor your employment conditions through our Terms of Employment Options Model. In this way, we encourage you to keep investing in your personal and professional development. For more information, please visit Working at Utrecht University. About us A better future for everyone. This ambition motivates our scientists in executing their leading research and inspiring teaching. At Utrecht University, the various disciplines collaborate intensively towards major strategic themes. Our focus is on Dynamics of Youth, Institutions for Open Societies, Life Sciences and Pathways to Sustainability. Sharing science, shaping tomorrow. Working at the Faculty of Science  external link  means bringing together inspiring people across disciplines and with a variety of perspectives and backgrounds. The Faculty has six departments: Biology, Pharmaceutical Sciences, Information & Computing Sciences, Physics, Chemistry and Mathematics. Together, we work on excellent research and inspiring education. We do so, driven by curiosity and supported by outstanding infrastructure. Visit us on LinkedIn and discover how you can become part of our community. The Genome Biology & Epigenetics (GBE)  external link  is embedded within the Institute of Biodynamics and Biocomplexity  external link , part of the Department of Biology  external link .  An inspiring and highly interactive scientific environment covering various disciplines ranging from Developmental Biology, Cell Biology, Neurobiology, Biophysics, Bioinformatics and Computational Biology. As part of this institute, the groups at the GBE aim to decipher how genetic and epigenetic information is processed into different gene expression programs. The Baubec lab  external link  takes a systems biology approach to understand the role of modifications on histones and DNA. Towards this, we combine various experimental and computational strategies, including genome and epigenome engineering, genome-wide studies, proteomics, single-cell measurements, and computational modelling. We use mouse embryonic stem cells and their differentiation to neuronal and haematopoietic cells as our main model system. This integrative approach allows us to understand gene regulatory mechanisms in a quantitative and functional manner. More information about the research in the group can be found here on our website  external link . More information For more information, please contact Tuncay Baubec  external link  at t.baubec@uu.nl. Do you have a question about the application procedure? Please send an email to science.recruitment@uu.nl.  Apply now As Utrecht University, we want to be a home for everyone. We value staff with diverse backgrounds, perspectives and identities, including cultural, religious or ethnic background, gender, sexual orientation, disability or age. We strive to create a safe and inclusive environment in which everyone can flourish and contribute. A knowledge security screening can be part of the selection procedures of academic staff. We do this, among other things, to prevent the unwanted transfer of sensitive knowledge and technology. If you are enthusiastic about this position, just apply via the “Apply now” button! Please enclose: your letter of motivation; your Curriculum vitae; the names, telephone numbers, and email addresses of at least two references. If this specific opportunity isn’t for you, but you know someone else who may be interested, please forward this vacancy to them.

Postdoctoal Researcher Position in Computational Antigen Discovery

At Utrecht University, we have built a specialized team focusing on the discovery of previously unidentified antigens for immunotherapies through mass spectrometry (MS)-based proteomics and immunopeptidomics. We now seek a highly motivated and experienced Postdoctoral Researcher to join our multidisciplinary research team.  Your job As a Postdoctoral Researcher in the group of dr Marino  external link , you will play a central role in advancing the group’s research through the development and application of state-of-the-art bioinformatics workflows for antigen identification, quantification, and validation.  You will support the whole team in data analysis and visualization for different proteogenomics projects. You will organize and merge multi-omics data (in collaboration with our partners at Princess Maxima Center) using AI/ML techniques, implement antigen data analysis and discovery processes, and contribute to the maintenance of data infrastructure in collaboration with internal team members and other multidisciplinary teams. In this role, you will also take the lead in developing new ideas and initiatives that advance the group’s research. This position will significantly impact the team by developing innovative bioinformatics pipelines, and by pinpointing and measuring the most immunogenic antigens for integration into vaccine-based therapies aimed at improving outcomes for patients with cancer. Finally, you will be involved in many different multicentered and multidisciplinary collaborations, with both industry as well as academia and medical institutes. This will increase your exposure and expand your own professional network, supporting your future scientific career.  Key Responsibilities Develop and maintain scalable pipelines for mass spectrometry (MS)-based proteomics and immunopeptidomics data analysis. Design integrative frameworks combining genomics, transcriptomics, ribosomal profiling and proteomics datasets. Develop and maintain high-quality pipelines for processing and visualizing large-scale proteogenomics, MS-based immunopeptidomics/proteomics data. Ensure reproducibility and scalability of workflows using modern workflow tools (es. Nextflow, Snakemake, CWL etc.). Contribute to scientific publications, grant writing, and presentations. Collaborate with internal/external groups to develop new analysis pipelines tailored to immunopeptidomics experiments. Stay at the forefront of scientific advances in mass spectrometry-based immunopeptidomics/proteomics including software and new methodologies. Your qualities Required qualifications and experience PhD in bioinformatics, computational biology, or a related field. Proven experience analysing different mass spectrometry-based immunopeptidomics/proteomics data (i.e. DDA, DIA, PRM) with platforms such as FragPipe, Peaks, Spectronaut, MaxQuant, Skyline or equivalent tools. Solid background in state-of-the-art packages and analysis pipelines in mass spectrometry-based immunopeptidomics. Experience with non-canonical HLA-bound peptide discovery pipelines, binding predictions and other in silico tools (es. Immunogenicity predictors and/or HLA-peptide-TCR binding etc). Experience in multi-modal data integration for prioritizing disease-specific targets: combining quantitative multi-omics approaches (es. RNA-seq, Ribo-seq, proteomics, immunopeptidomics). Strong programming skills in Python, R, or similar languages. Self-starting and collaborative attitude. Preferred qualifications and experience AI/ML applications: applying machine learning or AI to integrate, discover and prioritize disease-specific targets across omics. Our offer access to the newest and most advanced mass spectrometry instruments and computing infrastructures; a multidisciplinary environment within the group, with exposure to and collaborations with external partners beyond the lab; a social and diverse environment across the entire BioMS group with a strong sense of community, in including shared lunches and coffee breaks, a joint running group, Friday drinks and other social activities that extend beyond the laboratory; a position for initially 1 year; a gross monthly salary, depending on qualifications and experience, between € 3.546 and €5.538 in the case of full-time employment (salary scale 10 under the Collective Labour Agreement for Dutch Universities (CAO NU)); 8% holiday pay and 8.3% year-end bonus; a pension scheme, partially paid parental leave and flexible terms of employment based on the CAO NU. In addition to the terms of employment laid down in the CAO NU, Utrecht University also offers a range of its own schemes for employees. This includes arrangements for professional development, various types of leave, and options for sports and cultural activities. You can also tailor your employment conditions through our Terms of Employment Options Model. In this way, we encourage you to keep investing in your personal and professional development. For more information, please visit Working at Utrecht University. About us A better future for everyone. This ambition motivates our scientists in executing their leading research and inspiring teaching. At Utrecht University, the various disciplines collaborate intensively towards major strategic themes. Our focus is on Dynamics of Youth, Institutions for Open Societies, Life Sciences and Pathways to Sustainability. Sharing science, shaping tomorrow. Working at the Faculty of Science  external link  means bringing together inspiring people across disciplines and with a variety of perspectives and backgrounds. The Faculty has six departments: Biology, Pharmaceutical Sciences, Information & Computing Sciences, Physics, Chemistry and Mathematics. Together, we work on excellent research and inspiring education. We do so, driven by curiosity and supported by outstanding infrastructure. Visit us on LinkedIn and discover how you can become part of our community. The Utrecht Institute for Pharmaceutical Sciences (UIPS) is the research institute of the department of Pharmaceutical Sciences  external link  of Utrecht University. UIPS focuses on processes around discovery, development, and use of drugs and medical nutrition using molecular and technological principles from the Natural and Life Sciences.  You will be embedded in the division of Biomolecular Mass Spectrometry and Proteomics. The group consist of more than 60 researchers and supportive staff, with 18 different nationalities and many different expertise, including chemists, biologists, bioinformaticians and technical staff. The research in this division focuses on the use of mass spectrometry based enabling technologies to deeply understand the inner workings of cells at the molecular level. The group houses an excellent infrastructure that includes more than a dozen state-of-the-art mass spectrometers, combined with cell culture facilities and access to microscopes etc. The BioMS group is world-renown for mass spectrometry-based proteomics and structural biology, and applies these technologies to study amongst others cancer, auto-immune disorders, immunology, infections, and infectious diseases.  Within the BioMS group you will work in the team and under the guidance of dr. Fabio Marino. Dr. Marino received his PhD in the BioMS group, after which he moved to the biotech industry. With several years of industry experience, he came back to the BioMS group as an assistant professor, leading his own immunopeptidomics group. His group focuses on enhancing our knowledge of the

Position of Assistant or Associate Professor in Virology

The Virology section at Utrecht University is seeking an ambitious and creative virologist to develop an independent research line and contribute to teaching in virology within a vibrant One Health research environment. Your job The research of the Virology group focuses mainly on the molecular, cellular and structural mechanisms underlying infection and transmission of animal and human RNA viruses, including corona-, influenza-, paramyxo- and picornaviruses in the context of the faculty’s One Health research. In addition to fundamental research, the group performs translational research to develop innovative diagnostics, vaccines, therapeutic antibodies and antiviral strategies. As a principal investigator you will:  establish and lead an independent research line that complements and strengthens the ongoing research activities within the Virology group; acquire research funding and build and maintain contacts with academic and industrial partners; supervise PhD candidates, postdoctoral researchers, and technical staff; We are particularly interested in candidates whose research contributes to areas such as RNA viruses, virus-host interactions, viral pathogenesis, zoonotic infections, antiviral strategies, structural virology or translational virology. You will also contribute to Virology teaching within the Bachelor’s and Master’s programmes of Veterinary Medicine, Biomedical Sciences and Molecular and Cellular Life Sciences. Teaching tasks include lectures, practical courses, supervision of BSc and MSc students, as well as course development. Your teaching duties will average 0.2FTE, with peak periods when the courses are running. While some teaching is conducted in Dutch, candidates who are not yet proficient in Dutch are expected to be willing to learn the language (support for this can be made available if needed). The Virology section is part of the Division of Infectious Diseases & Immunology, together with the sections of Immunology, Infection Biology and Clinical Infectiology. The division is part of the Department of Biomolecular Health Sciences of the Faculty of Veterinary Medicine. Your qualities Depending on your experience and track record, the position will be offered at Assistant Professor or Associate Professor level. We are looking for an enthusiastic virologist with: a completed PhD in Virology or a closely related field; a clear vision for developing an independent research line that complements the current activities of the Virology group; for appointment as Assistant Professor: several years of relevant postdoctoral experience; for appointment as Associate Professor: an internationally recognised track record, successful acquisition of research projects, experience supervising PhD candidates, technicians and/or postdocs, and a strong publication record; for appointment as Associate Professor, a University Teaching Qualification; for appointment as Assistant Professor, the willingness to obtain one; proficiency in Dutch, or the willingness to learn Dutch; strong interpersonal and communication skills; the ability to collaborate effectively within interdisciplinary academic and translational research environments. Our offer a job for a period of 18 months, with the prospect of permanent employment following a go/no-go decision at month 18. The evaluation criteria for permanent employment will be discussed and agreed upon at the start of the appointment. a working week of 36 – 40 hours and a gross monthly salary between € 4.728 and €6.433 in the case of full-time employment (salary scale 11, 13 under the Collective Labour Agreement for Dutch Universities (CAO NU)); 8% holiday pay and 8.3% year-end bonus; a pension scheme, partially paid parental leave and flexible terms of employment based on the CAO NU. In addition to the terms of employment laid down in the CAO NU, Utrecht University also offers a range of its own schemes for employees. This includes arrangements for professional development, various types of leave, and options for sports and cultural activities. You can also tailor your employment conditions through our Terms of Employment Options Model. In this way, we encourage you to keep investing in your personal and professional development. For more information, please visit Working at Utrecht University. About us A better future for everyone. This ambition motivates our scientists in executing their leading research and inspiring teaching. At Utrecht University, the various disciplines collaborate intensively towards major strategic themes. Our focus is on Dynamics of Youth, Institutions for Open Societies, Life Sciences and Pathways to Sustainability. Sharing science, shaping tomorrow. At the Faculty of Veterinary Medicine we train the veterinarians and researchers of the future, provide care for animals and conduct leading and societal relevant research. That is what we are good at. We see that the health and welfare of animals, humans and the environment are interconnected. By sharing our knowledge and working together, we make positive impact, both nationally and internationally. Our 1,500 students and 950 staff members inspire and strengthen each other. Our engagement connects us. The drive to, from an integral perspective, make the world a better place. The Faculty is organised into three main departments: Biomolecular Health Sciences, Clinical Sciences and Population Health Sciences. In addition to the Division of Infectious Diseases & Immunology, the Department of Biomolecular Health Sciences contains the Divisions of Pathology and Cell Biology, Metabolism and Cancer. Within the department, research is performed on animals, humans and the environment at the molecular, cellular and tissue levels. Various divisions conduct research into infections and infectious diseases, with a particular focus on pathogenesis, the development of diagnostics, therapies and vaccines, and research into antimicrobial use and resistance. In addition to conducting research, providing education is one of the main tasks of the department. The Virology section, headed by Prof. Frank van Kuppeveld, consists of approximately 30 staff members. The section performs fundamental and translational research on several emerging, re-emerging, zoonotic and clinically important RNA viruses, and contributes to several teaching courses. For more information about the Virology Section and our research directions: https://www.uu.nl/en/organisation/faculty-of-veterinary-medicine/veterinary-research/research-programmes/infection-immunity/virology More information For more information, please contact Prof. Frank van Kuppeveld by email at f.j.m.vankuppeveld@uu.nl or by phone on +31 (0)30 253 4173. Please do not send your application letter to this email address. Apply now As Utrecht University, we want to be a home for everyone. We value staff with diverse backgrounds, perspectives and identities, including cultural, religious or ethnic background, gender, sexual orientation, disability or age. We strive to create a safe and inclusive environment in which everyone can flourish and contribute. A valid Certificate of Conduct (VOG) is required for this position. This will

Assistant Professor position in Biophysics of Living System

Job description  Imagine watching the inner workings of a living cell, where the fundamental laws of physics meet the complexity of life at the nanoscale. Since 2010, the Department of Bionanoscience at Delft University of Technology has been on a pioneering quest to decode these principles. We are a multidisciplinary and international community of scientists driven by a singular mission: to understand how interactions at the smallest scales give rise to biological function or the onset of disease. From observing the dance of single molecules to the bottom-up construction of synthetic cells, we bridge the gap between physics and the full complexity of living systems. Now, we invite you to join our group of 19 Principal Investigators at TU Delft to help us write the next chapter in our understanding of Life. The Department of Bionanoscience, part of the Kavli Institute of Nanoscience Delft, is a world-leading environment for fundamental research at the interface of biology and physics. We focus on biological processes from the level of single molecules to the full complexity of living cells. We seek an early career Principal Investigator who has demonstrated excellence in experimental research and thrives on conducting original research with impact, geared to understanding how life works, either at the molecular or cellular level. We encourage applications from researchers with a biophysics-oriented perspective or approach. Harnessing your communication skills, you inspire and convince funding agencies and partners of your vision and research. You actively seek collaboration with relevant faculties, universities and external stakeholders. In addition, you enjoy mentoring, teaching and interacting with students, while continuously developing yourself and your academic career. Your research will benefit from our in-house facilities, including a central optical microscopy, a cell culture, a protein purification, a cryo-EM, mass spectrometry, flowcytometry, and the Kavli Nanolab Delft cleanroom. Our laboratory space is located in a modern building with dedicated lab areas for building and operating sensitive physical instrumentation. As a Principal Investigator, you will: Establish an independent experimental research line that is complementary to our current strengths in single-molecule biophysics, synthetic biology, and quantitative cell biology. Secure external funding through competitive grants (e.g., NWO Vidi, ERC StG) to build and lead a team of PhD students, Postdocs and Technicians. Provide excellent education by teaching and developing courses for our unique BSc and MSc programs in Nanobiology; a program at the interface of biology, physics and math. Contribute to a collaborative culture, interacting synergistically with existing research groups and participating in the management of the department and our educational program(s). Job requirements  The ideal candidate is a creative experimentalist who thrives on scientific and engineering challenges. You should possess: A PhD in a relevant field (e.g., Biophysics, Biochemistry, Cell biology, Bionanotechnology) and relevant post-doctoral experience. An outstanding scientific track record, evidenced by high-quality publications. A clear vision for a new, independent experimental research line that uses advanced methodology to probe, manipulate or engineer cellular life or its components. A passion for education and the ability to inspire students in an international environment. Obtain the University Teaching Qualification (UTQ) within three years.  TU Delft (Delft University of Technology)  Working at TU Delft means contributing to solutions that really make a difference.  For over 180 years, we have been training engineers who make an impact worldwide in companies, government bodies, or as entrepreneurs. Our alumni turn knowledge into concrete solutions for the challenges of today and tomorrow.  These challenges are changing rapidly. That is why we focus on themes such as energy, climate, digitalisation, artificial intelligence (AI), and smart mobility every day. Our education and research are directly aligned with what society needs now and in the future.  At TU Delft, our people make the difference. With their knowledge and curiosity, our staff provide a high-quality education and conduct pioneering research that extends beyond the campus. You will have the opportunity to take the initiative, work with others, and grow as a professional.  Working at TU Delft means join an international community of professionals and students. Together, we create knowledge, innovations, and solutions that help move the world forward.  Faculty Applied Sciences  With more than 1,100 employees, including 150 pioneering principal investigators, as well as a population of about 3,600 passionate students, the Faculty of Applied Sciences is an inspiring scientific ecosystem. Focusing on key enabling technologies, such as quantum- and nanotechnology, photonics, biotechnology, synthetic biology and materials for energy storage and conversion, our faculty aims to provide solutions to important problems of the 21st century. To that end, we educate innovative students in broad Bachelor’s and specialist Master’s programmes with a strong research component. Our scientists conduct ground-breaking fundamental and applied research in the fields of Life and Health Science & Technology, Nanoscience, Chemical Engineering, Radiation Science & Technology, and Engineering Physics. We are also training the next generation of high school teachers.  Click here to go to the website of the Faculty of Applied Sciences.  Conditions of employment This position is offered as an Academic Career Track position (0.8 – 1.0 FTE). During the Academic Career Track, we expect you to grow towards an Associate Professor position within a maximum of eight years, for which a position will be available. With other Academic Career Track colleagues, you will participate in the Academic Career Track Development programme, where you are offered ample opportunities to develop yourself in the areas of Education, Research, Societal Impact & Innovation, and Leadership & Organisation. You will regularly discuss your development and results with senior staff based on a personalized development plan and performance criteria agreed upon at the start of your Academic Career Track. You will start with a temporary contract that will be converted to a permanent contract no later than 12 -18 months after a positive evaluation, based on continuous confidence in your development potential and fit in the organisation.  Inspiring, excellent education is our central aim. We expect you to obtain a University Teaching Qualification (UTQ) within three years if you have less than five years of teaching experience. This is provided by the TU Delft UTQ programme as

PhD Position for Identification of Structure-function Relationships in Methanogenic Microbiomes

Job description Anaerobic microbiomes are playing a crucial role in our society ranging from food fermentations, via the intestinal track towards waste bioprocessing in anaerobic digestors. In anaerobic microbiomes substrates are converted to a diverse array of products in an extremely complex network of different microorganisms that cooperate to establish the conversions observed. Depending on the conditions imposed, different product formation pathways are established involving different guilds of microorganisms. The objective of this project is to unravel the role of the different microorganisms in the microbiome to eventually obtain a quantitative description of the overall process. We have established an experimental infrastructure (UNLOCK) that enables paralelized high resolution phenotypic characterisation of microbiomes in bioreactors. Phenotypic characterisation will be combined with genotypic characterisation of the microbiomes in collaboration with our UNLOCK partners in Wageningen. This project combines laboratory bioreactor experiments with data processing and process modeling to obtain a quantitative description of the process as a resultant of the different guild of microorganisms involved. Consequently, besides a clear affinity with laboratory experiments and microbial communities, a strong data and computational/modeling background is desirable. The modeling framework that will be established in this project will contribute to a wide range of societal developments that depend on the understanding and control of anaerobic microbiomes. Job requirements Msc in life sciences, biotechnology, microbial ecology, or microbiology with a strong affinity for laboratory experiments and computational procedures for data processing and bioprocess modeling. TU Delft (Delft University of Technology)  Working at TU Delft means contributing to solutions that really make a difference.  For over 180 years, we have been training engineers who make an impact worldwide in companies, government bodies, or as entrepreneurs. Our alumni turn knowledge into concrete solutions for the challenges of today and tomorrow.  These challenges are changing rapidly. That is why we focus on themes such as energy, climate, digitalisation, artificial intelligence (AI), and smart mobility every day. Our education and research are directly aligned with what society needs now and in the future.  At TU Delft, our people make the difference. With their knowledge and curiosity, our staff provide a high-quality education and conduct pioneering research that extends beyond the campus. You will have the opportunity to take the initiative, work with others, and grow as a professional.  Working at TU Delft means join an international community of professionals and students. Together, we create knowledge, innovations, and solutions that help move the world forward.  Faculty Applied Sciences  With more than 1,100 employees, including 150 pioneering principal investigators, as well as a population of about 3,600 passionate students, the Faculty of Applied Sciences is an inspiring scientific ecosystem. Focusing on key enabling technologies, such as quantum- and nanotechnology, photonics, biotechnology, synthetic biology and materials for energy storage and conversion, our faculty aims to provide solutions to important problems of the 21st century. To that end, we educate innovative students in broad Bachelor’s and specialist Master’s programmes with a strong research component. Our scientists conduct ground-breaking fundamental and applied research in the fields of Life and Health Science & Technology, Nanoscience, Chemical Engineering, Radiation Science & Technology, and Engineering Physics. We are also training the next generation of high school teachers.  Click here to go to the website of the Faculty of Applied Sciences.  Conditions of employment Doctoral candidates will be offered a 4-year period of employment in principle, but in the form of 2 employment contracts. An initial 1,5 year contract with an official go/no go progress assessment within 15 months. Followed by an additional contract for the remaining 2,5 years assuming everything goes well and performance requirements are met.  Salary and benefits are in accordance with the Collective Labour Agreement for Dutch Universities, increasing from €3059 – €3881 gross per month, from the first year to the fourth year based on a fulltime contract (38 hours), plus 8% holiday allowance and an end-of-year bonus of 8.3%.   As a PhD candidate you will be enrolled in the TU Delft Graduate School. The TU Delft Graduate School provides an inspiring research environment with an excellent team of supervisors, academic staff and a mentor. The Doctoral Education Programme is aimed at developing your transferable, discipline-related and research skills.  The TU Delft offers a customisable compensation package, discounts on health insurance, and a monthly work costs contribution. Flexible work schedules can be arranged.   Will you need to relocate to the Netherlands for this job? TU Delft is committed to make your move as smooth as possible! The HR unit, Coming to Delft Service, offers information on their website to help you prepare your relocation. In addition, Coming to Delft Service organises events to help you settle in the Netherlands, and expand your (social) network in Delft. A Dual Career Programme is available, to support your accompanying partner with their job search in the Netherlands.   Additional informationFor more information about this vacancy, please contact Robbert Kleerebezem (r.kleerebezem@tudelft.nl) Application procedureAre you interested in this vacancy? Please apply no later than 16 August 2026 via the application button and upload the following documents: CV Motivational letter You can address your application to Robbert Kleerebezem. Doing a PhD at TU Delft requires English proficiency at a certain level to ensure that the candidate is able to communicate and interact well, participate in English-taught Doctoral Education courses, and write scientific articles and a final thesis. For more details please check the Graduate Schools Admission Requirements.  Please note: You can apply online. We will not process applications sent by email and/or post.  As part of knowledge security, TU Delft conducts a risk assessment during the recruitment of personnel. We do this, among other things, to prevent the unwanted transfer of sensitive knowledge and technology. The assessment is based on information provided by the candidates themselves, such as their motivation letter and CV, and takes place at the final stages of the selection process. When the outcome of the assessment is negative, the candidate will be informed. The processing of personal data in the context of the risk assessment is carried out on the legal basis of the GDPR: performing

PhD Position Metabolic Engineering for Cultivated Meat

Job description ‘Cultivated meat’, the production of genuine meat products from in vitro culture of animal cells, is an emerging biotechnology within the field of cellular agriculture with the potential to revolutionise food production from both an environmental and ethical perspective. Unfortunately, mammalian cells in their unmodified state have severe limitations with respect to in vitro culture, presenting major challenges for the scalability and cost-effectiveness of cultivated meat bioprocesses. These include slow proliferation, expensive medium requirements and suboptimal metabolic efficiency. Metabolic engineering, the controlled reprogramming of metabolism through the modification of existing pathways, and the addition of new ones, offers a potential solution! We are hiring for a PhD student to join the group for a fully-funded project of 4 years. Within the Flack group, you will develop tools and methods for metabolic engineering of bovine satellite cell lines, and use these to introduce new and improved metabolic phenotypes relating to (for example) efficiency of carbon-substrate utilization and de novo synthesis of currently essential, expensive medium components. Within the broad scope of metabolic engineering for cultivated meat, there will be freedom to direct your own research projects, and to become acquainted with new techniques and approaches. There will be opportunities to supervise MSc and BSc students in the group. Advice and discussion will be available for candidates interested in both academic and industry careers. We are a friendly, collaborative group and are looking for a highly motivated student with strong scientific communication skills. You will be joining a dynamic department with broad interests in biotechnology and synthetic biology across all domains of life. The research is funded as part of the Cellular Agriculture Netherlands Open Calls Programme, and will involve collaboration and coordination with various industrial parties and external experts For more information, please refer to the Flack Group website and/or get in touch.  Job requirements  The ideal candidate will be an ambitious, proactive, reflective, and results-driven researcher. We are looking for the following: MSc degree in a relevant field, such as cell biology, biotechnology or a related field of biological sciences (essential). Prior lab experience in molecular biology, cloning and genetic manipulation (essential). Prior experience with gene editing and/or cell engineering (e.g. CRISPR/Cas or related techniques – highly desirable). Prior experience with animal cell culture (desirable but not required). A strong interest in both metabolism and cellular agriculture/cultivated meat is essential, although specific prior experience in these areas is not expected or required. Strong collaboration, communication and writing skills.  TU Delft (Delft University of Technology)  Working at TU Delft means contributing to solutions that really make a difference.  For over 180 years, we have been training engineers who make an impact worldwide in companies, government bodies, or as entrepreneurs. Our alumni turn knowledge into concrete solutions for the challenges of today and tomorrow.  These challenges are changing rapidly. That is why we focus on themes such as energy, climate, digitalisation, artificial intelligence (AI), and smart mobility every day. Our education and research are directly aligned with what society needs now and in the future.  At TU Delft, our people make the difference. With their knowledge and curiosity, our staff provide a high-quality education and conduct pioneering research that extends beyond the campus. You will have the opportunity to take the initiative, work with others, and grow as a professional.  Working at TU Delft means join an international community of professionals and students. Together, we create knowledge, innovations, and solutions that help move the world forward.  Faculty Applied Sciences  With more than 1,100 employees, including 150 pioneering principal investigators, as well as a population of about 3,600 passionate students, the Faculty of Applied Sciences is an inspiring scientific ecosystem. Focusing on key enabling technologies, such as quantum- and nanotechnology, photonics, biotechnology, synthetic biology and materials for energy storage and conversion, our faculty aims to provide solutions to important problems of the 21st century. To that end, we educate innovative students in broad Bachelor’s and specialist Master’s programmes with a strong research component. Our scientists conduct ground-breaking fundamental and applied research in the fields of Life and Health Science & Technology, Nanoscience, Chemical Engineering, Radiation Science & Technology, and Engineering Physics. We are also training the next generation of high school teachers.  Click here to go to the website of the Faculty of Applied Sciences.  Conditions of employment  Doctoral candidates will be offered a 4-year period of employment in principle, but in the form of 2 employment contracts. An initial 1,5 year contract with an official go/no go progress assessment within 15 months. Followed by an additional contract for the remaining 2,5 years assuming everything goes well and performance requirements are met.  Salary and benefits are in accordance with the Collective Labour Agreement for Dutch Universities, increasing from €3059 – €3881 gross per month, from the first year to the fourth year based on a fulltime contract (38 hours), plus 8% holiday allowance and an end-of-year bonus of 8.3%.   As a PhD candidate you will be enrolled in the TU Delft Graduate School. The TU Delft Graduate School provides an inspiring research environment with an excellent team of supervisors, academic staff and a mentor. The Doctoral Education Programme is aimed at developing your transferable, discipline-related and research skills.  The TU Delft offers a customisable compensation package, discounts on health insurance, and a monthly work costs contribution. Flexible work schedules can be arranged.   Will you need to relocate to the Netherlands for this job? TU Delft is committed to make your move as smooth as possible! The HR unit, Coming to Delft Service, offers information on their website to help you prepare your relocation. In addition, Coming to Delft Service organises events to help you settle in the Netherlands, and expand your (social) network in Delft. A Dual Career Programme is available, to support your accompanying partner with their job search in the Netherlands.   Additional information For more information about this vacancy or our research group, please contact Dr. Joshua Flack (J.E.Flack@tudelft.nl). PhD position is envisaged to start at the end of 2026 or January 2027. Application procedure Are

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